Nathan A. Ellis, PhD

Professor, Cellular and Molecular Medicine

Chair, Genetics GIDP

Co-Program Leader, Cancer Biology Research Program

Professor, Cancer Biology GIDP

Research Interests:

Genomic Instability and Cancer Susceptibility

Development of invasive carcinoma is widely believed to rely on a nested series of somatic mutations that results in activation of oncogenes and deactivation of tumor suppressors. Although the accumulation of somatic mutations plays a central role, the tissue in which these mutations arise exerts control over the fate of these mutated cells. The steady increase of the incidence of cancers of the digestive tract raises pressing questions about tissue control and how environmental influences modulate and destabilize it. The Ellis laboratory currently focuses on epigenetic mechanisms involved in early-onset colorectal cancer.

Molecular Medicine Grad Program:

Yes

Bibliography

2023

Trejo, M. Jesus, K. Batai, Y. Chen, S. Brezina, H-H. Sherry Chow, N. Ellis, P. Lance, C-H. Hsu, K. Pogreba-Brown, M. Bishop, et al., "Genome-Wide Association Study of Metachronous Colorectal Adenoma Risk among Participants in the Selenium Trial.", Nutr Cancer, vol. 75, issue 1, pp. 143-153, 2023. PMCID: PMC10120393 PMID: 35815403

2022

de Renty, C., K. W. Pond, M. K. Yagle, and N. A. Ellis, "BLM Sumoylation Is Required for Replication Stability and Normal Fork Velocity During DNA Replication.", Front Mol Biosci, vol. 9, pp. 875102, 2022. PMCID: PMC9284272 PMID: 35847987

Pond, K. W., J. M. Morris, O. Alkhimenok, R. P. Varghese, C. R. Cabel, N. A. Ellis, J. Chakrabarti, Y. Zavros, J. L. Merchant, C. A. Thorne, et al., "Live-cell imaging in human colonic monolayers reveals ERK waves limit the stem cell compartment to maintain epithelial homeostasis.", Elife, vol. 11, 12/2022.

Belvitch, P., N. Casanova, X. Sun, S. M. Camp, S. Sammani, M. E. Brown, J. Mascarhenas, H. Lynn, D. Adyshev, J. Siegler, et al., "A cortactin CTTN coding SNP contributes to lung vascular permeability and inflammatory disease severity in African descent subjects.", Transl Res, vol. 244, pp. 56-74, 2022 Jun. PMCID: PMC9119916 PMID: 35181549

Giner-Calabuig, M., S. De Leon, J. Wang, T. D. Fehlmann, C. Ukaegbu, J. Gibson, M. Alustiza-Fernandez, M-D. Pico, C. Alenda, M. Herraiz, et al., "Mutational signature profiling classifies subtypes of clinically different mismatch-repair-deficient tumours with a differential immunogenic response potential.", Br J Cancer, vol. 126, issue 11, pp. 1595-1603, 2022 Jun. PMCID: PMC9130322 PMID: 35197584

Kwak, E-A., C. C. Pan, A. Ramonett, S. Kumar, P. Cruz-Flores, T. Ahmed, H. R. Ortiz, J. J. Lochhead, N. A. Ellis, G. Mouneimne, et al., "β-spectrin as a stalk cell-intrinsic regulator of VEGF signaling.", Nat Commun, vol. 13, issue 1, pp. 1326, 2022 Mar 14. PMCID: PMC8921520 PMID: 35288568

2021

Ellis, N., J. Zhu, M. K. Yagle, W-C. Yang, J. Huang, A. Kwako, M. M. Seidman, and M. J. Matunis, "RNF4 Regulates the BLM Helicase in Recovery From Replication Fork Collapse.", Front Genet, vol. 12, pp. 753535, 2021. PMCID: PMC8633118 PMID: 34868226

Martinez, J. A., M. B. Skiba, H-H. Sherry Chow, W. M. Chew, K. Saboda, P. Lance, N. A. Ellis, and E. T. Jacobs, "A Protective Role for Arachidonic Acid Metabolites against Advanced Colorectal Adenoma in a Phase III Trial of Selenium.", Nutrients, vol. 13, issue 11, 2021 Oct 29. PMCID: PMC8621008 PMID: 34836131

Batai, K., M. J. Trejo, Y. Chen, L. N. Kohler, P. Lance, N. A. Ellis, M. C. Cornelis, H-H. Sherry Chow, C-H. Hsu, and E. T. Jacobs, "Genome-Wide Association Study of Response to Selenium Supplementation and Circulating Selenium Concentrations in Adults of European Descent.", J Nutr, vol. 151, issue 2, pp. 293-302, 2021 02 01. PMCID: PMC7849979 PMID: 33382417

Grant, A., R. M. Xicola, V. Nguyen, J. Lim, C. Thorne, B. Salhia, X. Llor, N. Ellis, and M. Padi, "Molecular drivers of tumor progression in microsatellite stable APC mutation-negative colorectal cancers.", Sci Rep, vol. 11, issue 1, pp. 23507, 2021 12 06. PMCID: PMC8648784 PMID: 34873211

2020

Augustus, G. J., R. M. Xicola, X. Llor, and N. A. Ellis, "Decreased copy-neutral loss of heterozygosity in African American colorectal cancers.", Genes Chromosomes Cancer, vol. 59, issue 8, pp. 454-464, 2020 08. PMCID: PMC8045478 PMID: 32293075

2019

Zhou, J., T. G. Jenkins, A. M. Jung, K. Sook Jeong, J. Zhai, E. T. Jacobs, S. C. Griffin, D. Dearmon-Moore, S. R. Littau, W. F. Peate, et al., "DNA methylation among firefighters.", PLoS One, vol. 14, issue 3, pp. e0214282, 2019 03 26. PMCID: PMC6435149 PMID: 30913233

Xicola, R. M., J. R. Clark, T. Carroll, J. Alvikas, P. Marwaha, M. R. Regan, F. Lopez-Giraldez, J. Choi, R. Emmadi, V. Alagiozian-Angelova, et al., "Implication of DNA repair genes in Lynch-like syndrome.", Fam Cancer, vol. 18, issue 3, pp. 331-342, 2019 07 01. PMCID: PMC6561810 PMID: 30989425

A Taylor, M. R., C. Rothblum-Oviatt, N. A. Ellis, I. D. Hickson, S. Meyer, T. O. Crawford, A. Smogorzewska, B. Pietrucha, C. Weemaes, and G. S. Stewart, "Chromosome instability syndromes.", Nat Rev Dis Primers, vol. 5, issue 1, pp. 64, 2019 09 19. PMID: 31537806

Pond, K. W., and N. A. Ellis, "Quantification of Double-Strand Breaks in Mammalian Cells Using Pulsed-Field Gel Electrophoresis.", Methods Mol Biol, vol. 1999, pp. 75-85, 2019 05 25. PMID: 31127570

Pond, K. W., C. de Renty, M. K. Yagle, and N. A. Ellis, "Rescue of collapsed replication forks is dependent on NSMCE2 to prevent mitotic DNA damage.", PLoS Genet, vol. 15, issue 2, pp. e1007942, 2019 02 01. PMCID: PMC6383951 PMID: 30735491