Publications
2023
Batai, K., Y. Chen, B. A. Rheinheimer, A. Arora, R. Pandey, R. L. Heimark, E. R. Bracamonte, N. A. Ellis, and B. R. Lee, "Clear cell renal cell carcinoma molecular variations in non-Hispanic White and Hispanic patients.", Cancer Med, vol. 12, issue 11, pp. 12792-12801, 2023 Jun.
PMCID: PMC10278477 PMID: 37081700
Fowler, J. Wayne M., N. E. Boutagy, R. Zhang, D. Horikami, M. B. Whalen, C. E. Romanoski, and W. C. Sessa, "SREBP2 regulates the endothelial response to cytokines via direct transcriptional activation of KLF6.", J Lipid Res, vol. 64, issue 8, pp. 100411, 2023 Aug.
PMCID: PMC10407908 PMID: 37437844
Afshar, Y., F. Ma, A. Quach, A. Jeong, H. L. Sunshine, V. Freitas, Y. Jami-Alahmadi, R. Helaers, X. Li, M. Pellegrini, et al., "Transcriptional drifts associated with environmental changes in endothelial cells.", Elife, vol. 12, 2023 Mar 27.
PMCID: PMC10168696 PMID: 36971339
2022
Wheatley, L. M., J. W. Holloway, C. Svanes, M. R. Sears, C. Breton, A. V. Fedulov, E. Nilsson, D. Vercelli, H. Zhang, A. Togias, et al., "The Role of Epigenetics in Multi-generational Transmission of Asthma: an NIAID Workshop Report-based narrative review.", Clin Exp Allergy, 2022 Sep 08.
PMID: 36073598
Garcia, A. N., N. G. Casanova, D. G. Valera, X. Sun, J. H. Song, C. L. Kempf, L. Moreno-Vinasco, K. Burns, T. Bermudez, M. Valdez, et al., "Involvement of eNAMPT/TLR4 signaling in murine radiation pneumonitis: protection by eNAMPT neutralization.", Transl Res, vol. 239, pp. 44-57, 2022 Jan.
PMCID: PMC8671169 PMID: 34139379
DeVries, A., K. McCauley, D. Fadrosh, K. E. Fujimura, D. A. Stern, S. V. Lynch, and D. Vercelli, "Maternal prenatal immunity, neonatal trained immunity, and early airway microbiota shape childhood asthma development.", Allergy, 2022 Jul 16.
PMID: 35841380
Shen, Z., R. Z. Li, T. A. Prohaska, M. A. Hoeksema, N. J. Spann, J. Tao, G. J. Fonseca, T. Le, L. K. Stolze, M. Sakai, et al., "Systematic analysis of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs.", Elife, vol. 11, 2022 Jan 20.
PMID: 35049498
Li, X., S. Guerra, J. G. Ledford, M. Kraft, H. Li, A. T. Hastie, M. Castro, L. C. Denlinger, S. C. Erzurum, J. V. Fahy, et al., "Low CC16 mRNA Expression Levels in Bronchial Epithelial Cells Are Associated with Asthma Severity.", Am J Respir Crit Care Med, 2022 Sep 06.
PMID: 36066606
Stansfield, B. N., S. Rangasamy, K. Ramsey, M. Khanna, and J. M. Churko, "Generation of an iPSC line from a Pontocerebellar Hypoplasia 1B patient harboring a homozygous c.395 A > C mutation in EXOSC3 along with a family matched control.", Stem Cell Res, vol. 65, pp. 102944, 2022 Dec.
PMCID: PMC9729447 PMID: 36257093
Pederson, W. P., L. M. Ellerman, E. C. Sandoval, S. Boitano, J. B. Frye, K. P. Doyle, H. L. Brooks, F. Polverino, and J. G. Ledford, "Development of a Novel Mouse Model of Menopause-associated Asthma.", Am J Respir Cell Mol Biol, vol. 67, issue 5, pp. 605-609, 2022 Nov.
PMID: 36318015
Chakrabarti, J., R. Pandey, J. M. Churko, J. Eschbacher, S. Mallick, Y. Chen, B. Hermes, P. Mallick, B. N. Stansfield, K. W. Pond, et al., "Development of Human Pituitary Neuroendocrine Tumor Organoids to Facilitate Effective Targeted Treatments of Cushing's Disease.", Cells, vol. 11, issue 21, 2022 Oct 23.
PMCID: PMC9659185 PMID: 36359740
Ryniawec, J. M., M. R. Coope, E. Loertscher, V. Bageerathan, D. de Oliveir Pessoa, N. A. Warfel, A. E. Cress, M. Padi, and G. C. Rogers, "GLUT3/SLC2A3 Is an Endogenous Marker of Hypoxia in Prostate Cancer Cell Lines and Patient-Derived Xenograft Tumors.", Diagnostics (Basel), vol. 12, issue 3, 2022 Mar 10.
PMCID: PMC8946944 PMID: 35328229
Belvitch, P., N. Casanova, X. Sun, S. M. Camp, S. Sammani, M. E. Brown, J. Mascarhenas, H. Lynn, D. Adyshev, J. Siegler, et al., "A cortactin CTTN coding SNP contributes to lung vascular permeability and inflammatory disease severity in African descent subjects.", Transl Res, vol. 244, pp. 56-74, 2022 Jun.
PMCID: PMC9119916 PMID: 35181549
Ryniawec, J. M., and G. C. Rogers, "Balancing the scales: fine-tuning Polo-like kinase 4 to ensure proper centriole duplication.", Genes Dev, vol. 36, issue 11-12, pp. 647-649, 2022 Jun 01.
PMCID: PMC9296006 PMID: 35835509
Giner-Calabuig, M., S. De Leon, J. Wang, T. D. Fehlmann, C. Ukaegbu, J. Gibson, M. Alustiza-Fernandez, M-D. Pico, C. Alenda, M. Herraiz, et al., "Mutational signature profiling classifies subtypes of clinically different mismatch-repair-deficient tumours with a differential immunogenic response potential.", Br J Cancer, vol. 126, issue 11, pp. 1595-1603, 2022 Jun.
PMCID: PMC9130322 PMID: 35197584
Kwak, E-A., C. C. Pan, A. Ramonett, S. Kumar, P. Cruz-Flores, T. Ahmed, H. R. Ortiz, J. J. Lochhead, N. A. Ellis, G. Mouneimne, et al., "β-spectrin as a stalk cell-intrinsic regulator of VEGF signaling.", Nat Commun, vol. 13, issue 1, pp. 1326, 2022 Mar 14.
PMCID: PMC8921520 PMID: 35288568
Kang, HJ., S. Allison, A. Spangenberg, T. Carr, R. Sprissler, M. Halonen, and D. A. Cusanovich, "Evaluation of Swab-Seq as a scalable, sensitive assay for community surveillance of SARS-CoV-2 infection.", Sci Rep, vol. 12, issue 1, pp. 3047, 23 FEB 2022.
PMCID: PMC8866503 PMID: 35197492
de Renty, C., K. W. Pond, M. K. Yagle, and N. A. Ellis, "BLM Sumoylation Is Required for Replication Stability and Normal Fork Velocity During DNA Replication.", Front Mol Biosci, vol. 9, pp. 875102, 2022.
PMCID: PMC9284272 PMID: 35847987
Toth, R. K., R. Solomon, and N. A. Warfel, "Stabilization of PIM Kinases in Hypoxia Is Mediated by the Deubiquitinase USP28.", Cells, vol. 11, issue 6, 2022 Mar 16.
PMCID: PMC8947361 PMID: 35326457
Toropainen, A., L. K. Stolze, T. Örd, M. B. Whalen, P. Martí Torrell, V. M. Link, M. U. Kaikkonen, and C. E. Romanoski, "Functional noncoding SNPs in human endothelial cells fine-map vascular trait associations.", Genome Res, vol. 32, issue 3, pp. 409-424, 2022 03.
PMCID: PMC8896458 PMID: 35193936
Pond, K. W., J. M. Morris, O. Alkhimenok, R. P. Varghese, C. R. Cabel, N. A. Ellis, J. Chakrabarti, Y. Zavros, J. L. Merchant, C. A. Thorne, et al., "Live-cell imaging in human colonic monolayers reveals ERK waves limit the stem cell compartment to maintain epithelial homeostasis.", Elife, vol. 11, 12/2022.
Harryman, W. L., K. D. Marr, R. B. Nagle, and A. E. Cress, "Integrins and Epithelial-Mesenchymal Cooperation in the Tumor Microenvironment of Muscle-Invasive Lethal Cancers.", Front Cell Dev Biol, vol. 10, pp. 837585, 2022.
PMCID: PMC8921537 PMID: 35300411
Pali-Schöll, I., R. Bianchini, S. Moussa Afify, G. Hofstetter, S. Winkler, S. Ahlers, T. Altemeier, H. Mayerhofer, K. Hufnagl, A. D. J. Korath, et al., "Secretory protein beta-lactoglobulin in cattle stable dust may contribute to the allergy-protective farm effect.", Clin Transl Allergy, vol. 12, issue 2, pp. e12125, 2022 Feb.
PMCID: PMC8840802 PMID: 35169442
Chakrabarti, J. T., J. Eschbacher, S. Mallick, Y. Chen, B. Hermes, P. Mallick, K. W. Pond, C. A. Thorne, K. Yuen, A. Little, et al., "A Novel Human Pituitary Adenoma Model to Accelerate Targeted Treatment of Cushing's Disease", J Neurol Surg, 2022.
Chen, W., J. M. C. Gard, Y. Epshtein, S. M. Camp, J. G. N. Garcia, J. R. Jacobson, and A. E. Cress, "Integrin Beta 4E Promotes Endothelial Phenotypic Changes and Attenuates Lung Endothelial Cell Inflammatory Responses.", Front Physiol, vol. 13, pp. 769325, 2022.
PMCID: PMC8895044 PMID: 35250607