Publications

2021

Wusterbarth, E., Y. Chen, H. Jecius, E. Krall, R. B. Runyan, R. Pandey, and V. Nfonsam, "Cartilage Oligomeric Matrix Protein, COMP may be a Better Prognostic Marker Than CEACAM5 and Correlates With Colon Cancer Molecular Subtypes, Tumor Aggressiveness and Overall Survival.", J Surg Res, vol. 270, pp. 169-177, 2021 Oct 20. PMID: 34687957
Örd, T., K. Õunap, L. Stolze, R. Aherrahrou, V. Nurminen, I. Selvarajan, A. Toropainen, T. Lönnberg, E. Aavik, S. Ylä-Herttuala, et al., "Single-Cell Epigenomics and Functional Fine-Mapping of Atherosclerosis GWAS Loci.", Circ Res, 2021 May 24. PMID: 34024118
Pandey, R., M. Zhou, Y. Chen, D. Darmoul, C. C. Kisiel, V. N. Nfonsam, and N. A. Ignatenko, "Molecular Pathways Associated with Kallikrein 6 Overexpression in Colorectal Cancer.", Genes (Basel), vol. 12, issue 5, 2021 05 16. PMCID: PMC8157155  PMID: 34065672
Polverino, F., T. David Wu, J. Rojas-Quintero, X. Wang, J. Mayo, M. Tomchaney, J. Tram, S. Packard, D. Zhang, K. H. Cleveland, et al., "Metformin: Experimental and Clinical Evidence for a Potential Role in Emphysema Treatment.", Am J Respir Crit Care Med, 2021 May 25. PMID: 34033525
Cheng, J. N., J. B. Frye, S. A. Whitman, A. G. Kunihiro, R. Pandey, and J. L. Funk, "A Role for TGFβ Signaling in Preclinical Osteolytic Estrogen Receptor-Positive Breast Cancer Bone Metastases Progression.", Int J Mol Sci, vol. 22, issue 9, 2021 Apr 24. PMCID: PMC8123146  PMID: 33923316
Casillas, A. L., S. S. Chauhan, R. K. Toth, A. G. Sainz, A. N. Clements, C. C. Jensen, P. R. Langlais, C. K. Miranti, A. E. Cress, and N. A. Warfel, "Direct phosphorylation and stabilization of HIF-1α by PIM1 kinase drives angiogenesis in solid tumors.", Oncogene, 2021 Jul 02. PMID: 34211090
Pederson, W. P., J. M. Cyphert-Daly, R. M. Tighe, L. G. Que, and J. G. Ledford, "Genetic variation in surfactant protein-A2 alters responses to ozone.", PLoS One, vol. 16, issue 2, pp. e0247504, 2021. PMCID: PMC7899376  PMID: 33617569
Conklin, A. C., H. Nishi, F. Schlamp, T. Örd, K. Õunap, M. U. Kaikkonen, E. A. Fisher, and C. E. Romanoski, "Meta-Analysis of Smooth Muscle Lineage Transcriptomes in Atherosclerosis and Their Relationships to In Vitro Models.", Immunometabolism, vol. 3, issue 3, 2021. PMCID: PMC8232871  PMID: 34178388
Singh, N., V. R. Ramnarine, J. H. Song, R. Pandey, S. K. R. Padi, M. Nouri, V. Olive, M. Kobelev, K. Okumura, D. McCarthy, et al., "The long noncoding RNA H19 regulates tumor plasticity in neuroendocrine prostate cancer.", Nat Commun, vol. 12, issue 1, pp. 7349, 2021 Dec 21. PMID: 34934057

2020

Merritt, E. F., H. J. Johnson, Z. Sheen Wong, A. S. Buntzman, A. C. Conklin, C. M. Cabral, C. E. Romanoski, J. P. Boyle, and A. A. Koshy, "Transcriptional Profiling Suggests T Cells Cluster around Neurons Injected with Toxoplasma gondii Proteins.", mSphere, vol. 5, issue 5, 2020 09 02. PMCID: PMC7471001  PMID: 32878927
Augustus, G. J., R. M. Xicola, X. Llor, and N. A. Ellis, "Decreased copy-neutral loss of heterozygosity in African American colorectal cancers.", Genes Chromosomes Cancer, vol. 59, issue 8, pp. 454-464, 2020 08. PMCID: PMC8045478  PMID: 32293075
Dy, A. B. C., and J. G. Ledford, "IL-13Rα2 Glycosylation Holds the Dance Card for Partnering with IL-13.", Am J Respir Cell Mol Biol, vol. 63, issue 3, pp. 277-278, 2020 09. PMCID: PMC7462345  PMID: 32459972
Iesa, M. Am, M. Em Osman, M. A. Hassan, A. Ia Dirar, N. Abuzeid, J. J. Mancuso, R. Pandey, A. A. Mohammed, M. J. Borad, H. M. Babiker, et al., "SARS-COV2 and common immunodominant regions may explain low COVID-19 incidence in the malaria-endemic belt.", New Microbes New Infect, pp. 100817, 2020 Nov 19. PMCID: PMC7674012  PMID: 33230417
Francisco, D., Y. Wang, M. Conway, A. N. Hurbon, A. B. C. Dy, K. J. Addison, H. W. Chu, D. R. Voelker, J. G. Ledford, and M. Kraft, "Surfactant Protein-A Protects against IL-13-Induced Inflammation in Asthma.", J Immunol, vol. 204, issue 10, pp. 2829-2839, 2020 05 15. PMCID: PMC7304346  PMID: 32245819
De Vita, E., N. Smits, H. van den Hurk, E. M. Beck, J. Hewitt, G. Baillie, E. Russell, A. Pannifer, V. Hamon, A. Morrison, et al., "Synthesis and Structure-Activity Relationships of N-(4-Benzamidino)-Oxazolidinones: Potent and Selective Inhibitors of Kallikrein-Related Peptidase 6.", ChemMedChem, vol. 15, issue 1, pp. 79-95, 2020 01 07. PMCID: PMC7004151  PMID: 31675166
Johnson, M. D., U. S. Younis, S. V. Menghani, K. J. Addison, M. Whalen, A. L. Pilon, A. E. Cress, F. Polverino, C. Romanoski, M. Kraft, et al., "CC16 Binding to α4β1 Integrin (VLA-4) Protects Against Infection.", Am J Respir Crit Care Med, 2020 Dec 16. PMID: 33326355
Dakhama, A., R. Al Mubarak, N. Pavelka, D. Voelker, M. Seibold, J. G. Ledford, M. Kraft, L. Li, and H. Wei Chu, "Tollip Inhibits ST2 Signaling in Airway Epithelial Cells Exposed to Type 2 Cytokines and Rhinovirus.", J Innate Immun, vol. 12, issue 1, pp. 103-115, 2020. PMCID: PMC6959119  PMID: 30928973
Beh, S. Theng, C. Frisch, D. A. Brafman, J. Churko, J. E. Walker, G. E. Serrano, L. I. Sue, E. M. Reiman, T. G. Beach, and L-F. Lue, "Human Autopsy-Derived Scalp Fibroblast Biobanking for Age-Related Neurodegenerative Disease Research.", Cells, vol. 9, issue 11, 2020 Oct 30. PMCID: PMC7692621  PMID: 33143239
Kelly, G. T., R. Faraj, Z. Dai, A. E. Cress, and T. Wang, "A mutation found in esophageal cancer alters integrin β4 mRNA splicing.", Biochem Biophys Res Commun, vol. 529, issue 3, pp. 726-732, 2020 08 27. PMID: 32736699
Rai, V., D. X. Quang, M. R. Erdos, D. A. Cusanovich, R. M. Daza, N. Narisu, L. S. Zou, J. P. Didion, Y. Guan, J. Shendure, et al., "Single-cell ATAC-Seq in human pancreatic islets and deep learning upscaling of rare cells reveals cell-specific type 2 diabetes regulatory signatures.", Mol Metab, vol. 32, pp. 109-121, 2020 02 01. PMCID: PMC6961712  PMID: 32029221
Muralidharan, P., E. K. Mallory, M. Malapit, H. Phan, J. G. Ledford, D. Hayes, and H. M. Mansour, "Advanced design and development of nanoparticle/microparticle dual-drug combination lactose carrier-free dry powder inhalation aerosols.", RSC Adv, vol. 10, issue 68, pp. 41846-41856, 2020 Nov 17. PMCID: PMC7689944  PMID: 33391731
Dodla, P., V. Bhoopalan, S. Kean Khoo, C. Miranti, and S. Sridhar, "Gene expression analysis of human prostate cell lines with and without tumor metastasis suppressor CD82.", BMC Cancer, vol. 20, issue 1, pp. 1211, 12/2020. PMCID: PMC7724878  PMID: 33298014
Jabart, E., J. Molho, K. Sin, B. Stansfield, S. G. Kazmouz, D. Ventro, K. Gardner, J. C. Wu, and J. M. Churko, "Single-cell protein expression of hiPSC-derived cardiomyocytes using Single-Cell Westerns.", J Mol Cell Cardiol, vol. 149, pp. 115-122, 2020 Dec. PMCID: PMC7736541  PMID: 33010256
Domcke, S., A. J. Hill, R. M. Daza, J. Cao, D. R. O'Day, H. A. Pliner, K. A. Aldinger, D. Pokholok, F. Zhang, J. H. Milbank, et al., "A human cell atlas of fetal chromatin accessibility.", Science, vol. 370, issue 6518, 2020 11 13. PMCID: PMC7785298  PMID: 33184180
Sun, B. L., X. Sun, N. Casanova, A. N. Garcia, R. Oita, A. M. Algotar, S. M. Camp, V. Reyes Hernon, T. Gregory, A. E. Cress, et al., "Role of secreted extracellular nicotinamide phosphoribosyltransferase (eNAMPT) in prostate cancer progression: Novel biomarker and therapeutic target.", EBioMedicine, vol. 61, pp. 103059, 2020 Nov. PMCID: PMC7559260  PMID: 33045468

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