Publications

2018

Xie, S., J. B. Reinecke, T. Farmer, K. Bahl, I. Yeow, B. J. Nichols, T. A. McLamarrah, N. Naslavsky, G. C. Rogers, and S. Caplan, "Vesicular trafficking plays a role in centriole disengagement and duplication.", Mol Biol Cell, vol. 29, issue 22, pp. 2622-2631, 2018 Nov 01. PMCID: PMC6249839  PMID: 30188792
Brynnel, A., Y. Hernandez, B. Kiss, J. Lindqvist, M. Adler, J. Kolb, R. van der Pijl, J. Gohlke, J. Strom, J. Smith, et al., "Downsizing the molecular spring of the giant protein titin reveals that skeletal muscle titin determines passive stiffness and drives longitudinal hypertrophy.", Elife, vol. 7, 2018 12 19. PMCID: PMC6300359  PMID: 30565562
Pollan, S. G., F. Huang, J. M. Sperger, J. M. Lang, C. Morrissey, A. E. Cress, C. Y. Chu, N. A. Bhowmick, S. You, M. R. Freeman, et al., "Regulation of inside-out β1-integrin activation by CDCP1.", Oncogene, vol. 37, issue 21, pp. 2817-2836, 2018 05. PMID: 29511352
Chakrabarti, J., L. Holokai, LJ. Syu, N. Steele, J. Chang, A. Dlugosz, and Y. Zavros, "Mouse-Derived Gastric Organoid and Immune Cell Co-culture for the Study of the Tumor Microenvironment.", Methods Mol Biol, vol. 1817, pp. 157-168, 2018. PMID: 29959712
Boese, C. J., J. Nye, D. W. Buster, T. A. McLamarrah, A. E. Byrnes, K. C. Slep, N. M. Rusan, and G. C. Rogers, "Asterless is a Polo-like kinase 4 substrate that both activates and inhibits kinase activity depending on its phosphorylation state.", Mol Biol Cell, vol. 29, issue 23, pp. 2874-2886, 2018 Nov 15. PMCID: PMC6249866  PMID: 30256714
Vercelli, D., "Are we what our mothers made us? Lessons from epigenetics.", J Allergy Clin Immunol, vol. 141, issue 2, pp. 525-526, 2018 Feb. PMID: 29274413
Avery, R. J., S. K. Yu, G. Cherukuri, R. B. Runyan, J. Konhilas, and Z. I. Khalpey, "Remodeling Failing Human Myocardium With Hybrid Cell/Matrix and Transmyocardial Revascularization.", ASAIO J, vol. 64, issue 5, pp. e130-e133, 2018 Sep/Oct. PMID: 29189425
Teal, E., N. Bertaux-Skeirik, J. Chakrabarti, L. Holokai, and Y. Zavros, "Establishment of Human- and Mouse-Derived Gastric Primary Epithelial Cell Monolayers from Organoids.", Methods Mol Biol, vol. 1817, pp. 145-155, 2018. PMID: 29959711
Phung, L. A., S. M. Karvinen, B. A. Colson, D. D. Thomas, and D. A. Lowe, "Age affects myosin relaxation states in skeletal muscle fibers of female but not male mice.", PLoS One, vol. 13, issue 9, pp. e0199062, 2018. PMCID: PMC6143227  PMID: 30226869
DeVries, A., and D. Vercelli, "Of pleiotropy and trajectories: Does the TGF-β pathway link childhood asthma and chronic obstructive pulmonary disease?", J Allergy Clin Immunol, vol. 141, issue 6, pp. 1992-1996, 2018 Jun. PMCID: PMC5996766  PMID: 29709672
Harris, A. P., K. A. Ismail, M. Nunez, I. Martopullo, A. Lencinas, O. I. Selmin, and R. B. Runyan, "Trichloroethylene perturbs HNF4a expression and activity in the developing chick heart.", Toxicol Lett, vol. 285, pp. 113-120, 2018 Mar 15. PMCID: PMC5803365  PMID: 29306027
Silva, P. J., V. M. Schaibley, and K. S. Ramos, "Academic medical centers as innovation ecosystems to address population -omics challenges in precision medicine.", J Transl Med, vol. 16, issue 1, pp. 28, 2018 02 15. PMCID: PMC5815198  PMID: 29448963
Teal, E., N. G. Steele, J. Chakrabarti, L. Holokai, and Y. Zavros, "Mouse- and Human-derived Primary Gastric Epithelial Monolayer Culture for the Study of Regeneration.", J Vis Exp, issue 135, 2018 05 07. PMCID: PMC6101118  PMID: 29782013
Miyata, N., L. L. Morris, Q. Chen, C. Thorne, A. Singla, W. Zhu, M. Winter, S. D. Melton, H. Li, L. Sifuentes-Dominguez, et al., "Microbial Sensing by Intestinal Myeloid Cells Controls Carcinogenesis and Epithelial Differentiation.", Cell Rep, vol. 24, issue 9, pp. 2342-2355, 2018 Aug 28. PMCID: PMC6177233  PMID: 30157428
Bunch, T. A., V. C. Lepak, R-S. Kanassatega, and B. A. Colson, "N-terminal extension in cardiac myosin-binding protein C regulates myofilament binding.", J Mol Cell Cardiol, vol. 125, pp. 140-148, 2018 Dec. PMCID: PMC6366860  PMID: 30359561
Tavares, A. L. P., J. A. Brown, E. C. Ulrich, K. Dvorak, and R. B. Runyan, "Runx2-I is an Early Regulator of Epithelial-Mesenchymal Cell Transition in the Chick Embryo.", Dev Dyn, vol. 247, issue 3, pp. 542-554, 2018 Mar. PMCID: PMC5736463  PMID: 28631378
Cox, C. M., R. Lu, K. Salcin, and J. M. Wilson, "The Endosomal Protein Endotubin Is Required for Enterocyte Differentiation.", Cell Mol Gastroenterol Hepatol, vol. 5, issue 2, pp. 145-156, 2018. PMCID: PMC5756061  PMID: 29322087
Zavros, Y., "The Novel Role of as a Regulator of Cell Homeostasis and Disease of the Gastric Oxyntic Mucosa.", Cell Mol Gastroenterol Hepatol, vol. 5, issue 4, pp. 645-646, 2018. PMCID: PMC5924750  PMID: 29713667
Thorne, C. A., I. W. Chen, L. E. Sanman, M. H. Cobb, L. F. Wu, and S. J. Altschuler, "Enteroid Monolayers Reveal an Autonomous WNT and BMP Circuit Controlling Intestinal Epithelial Growth and Organization.", Dev Cell, vol. 44, issue 5, pp. 624-633.e4, 2018 03 12. PMCID: PMC5849535  PMID: 29503158
Runyan, R. B., and P. Savagner, "Epithelial-mesenchymal transition and plasticity in the developmental basis of cancer and fibrosis.", Dev Dyn, vol. 247, issue 3, pp. 330-331, 2018 Mar. PMID: 29446197
McLamarrah, T. A., D. W. Buster, B. J. Galletta, C. J. Boese, J. M. Ryniawec, N. Ann Hollingsworth, A. E. Byrnes, C. W. Brownlee, K. C. Slep, N. M. Rusan, et al., "An ordered pattern of Ana2 phosphorylation by Plk4 is required for centriole assembly.", J Cell Biol, vol. 217, issue 4, pp. 1217-1231, 2018 Apr 02. PMCID: PMC5881488  PMID: 29496738
Yellowhair, M., M. R. Romanotto, D. M. Stearns, and C. R Lantz, "Uranyl acetate induced DNA single strand breaks and AP sites in Chinese hamster ovary cells.", Toxicol Appl Pharmacol, vol. 349, pp. 29-38, 2018 06 15. PMCID: PMC5972677  PMID: 29698738
Cusanovich, D. A., A. J. Hill, D. Aghamirzaie, R. M. Daza, H. A. Pliner, J. B. Berletch, G. N. Filippova, X. Huang, L. Christiansen, W. S. DeWitt, et al., "A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibility.", Cell, 2018 Jul 18. PMID: 30078704
Thomas, A. N., R. A. Root, C. R Lantz, E. A Sáez, and J. Chorover, "Oxidative weathering decreases bioaccessibility of toxic metal(loid)s in PM emissions from sulfide mine tailings.", Geohealth, vol. 2, issue 4, pp. 118-138, 2018 Apr. PMCID: PMC6191178  PMID: 30338309
Pliner, H. A., J. S. Packer, J. L. McFaline-Figueroa, D. A. Cusanovich, R. M. Daza, D. Aghamirzaie, S. Srivatsan, X. Qiu, D. Jackson, A. Minkina, et al., "Cicero Predicts cis-Regulatory DNA Interactions from Single-Cell Chromatin Accessibility Data.", Mol Cell, 2018 Jul 23. PMID: 30078726

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