Publications
2022
Shen, Z., R. Z. Li, T. A. Prohaska, M. A. Hoeksema, N. J. Spann, J. Tao, G. J. Fonseca, T. Le, L. K. Stolze, M. Sakai, et al., "Systematic analysis of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs.", Elife, vol. 11, 2022 Jan 20.
PMID: 35049498
Li, X., S. Guerra, J. G. Ledford, M. Kraft, H. Li, A. T. Hastie, M. Castro, L. C. Denlinger, S. C. Erzurum, J. V. Fahy, et al., "Low CC16 mRNA Expression Levels in Bronchial Epithelial Cells Are Associated with Asthma Severity.", Am J Respir Crit Care Med, 2022 Sep 06.
PMID: 36066606
Stansfield, B. N., S. Rangasamy, K. Ramsey, M. Khanna, and J. M. Churko, "Generation of an iPSC line from a Pontocerebellar Hypoplasia 1B patient harboring a homozygous c.395 A > C mutation in EXOSC3 along with a family matched control.", Stem Cell Res, vol. 65, pp. 102944, 2022 Dec.
PMCID: PMC9729447 PMID: 36257093
Pederson, W. P., L. M. Ellerman, E. C. Sandoval, S. Boitano, J. B. Frye, K. P. Doyle, H. L. Brooks, F. Polverino, and J. G. Ledford, "Development of a Novel Mouse Model of Menopause-associated Asthma.", Am J Respir Cell Mol Biol, vol. 67, issue 5, pp. 605-609, 2022 Nov.
PMID: 36318015
Chakrabarti, J., R. Pandey, J. M. Churko, J. Eschbacher, S. Mallick, Y. Chen, B. Hermes, P. Mallick, B. N. Stansfield, K. W. Pond, et al., "Development of Human Pituitary Neuroendocrine Tumor Organoids to Facilitate Effective Targeted Treatments of Cushing's Disease.", Cells, vol. 11, issue 21, 2022 Oct 23.
PMCID: PMC9659185 PMID: 36359740
Ryniawec, J. M., M. R. Coope, E. Loertscher, V. Bageerathan, D. de Oliveir Pessoa, N. A. Warfel, A. E. Cress, M. Padi, and G. C. Rogers, "GLUT3/SLC2A3 Is an Endogenous Marker of Hypoxia in Prostate Cancer Cell Lines and Patient-Derived Xenograft Tumors.", Diagnostics (Basel), vol. 12, issue 3, 2022 Mar 10.
PMCID: PMC8946944 PMID: 35328229
Belvitch, P., N. Casanova, X. Sun, S. M. Camp, S. Sammani, M. E. Brown, J. Mascarhenas, H. Lynn, D. Adyshev, J. Siegler, et al., "A cortactin CTTN coding SNP contributes to lung vascular permeability and inflammatory disease severity in African descent subjects.", Transl Res, vol. 244, pp. 56-74, 2022 Jun.
PMCID: PMC9119916 PMID: 35181549
2021
Krishnan, K. Chella, L. Vergnes, R. Acín-Pérez, L. Stiles, M. Shum, L. Ma, E. Mouisel, C. Pan, T. M. Moore, M. Péterfy, et al., "Sex-specific genetic regulation of adipose mitochondria and metabolic syndrome by Ndufv2.", Nat Metab, 2021 Oct 25.
PMID: 34697471
Selvarajan, I., A. Toropainen, K. M. Garske, M. López Rodríguez, A. Ko, Z. Miao, D. Kaminska, K. Õunap, T. Örd, A. Ravindran, et al., "Integrative analysis of liver-specific non-coding regulatory SNPs associated with the risk of coronary artery disease.", Am J Hum Genet, vol. 108, issue 3, pp. 411-430, 2021 03 04.
PMCID: PMC8008493 PMID: 33626337
Iannuzo, N., M. Insel, C. Marshall, W. P. Pederson, K. J. Addison, F. Polverino, S. Guerra, and J. G. Ledford, "CC16 deficiency in the context of early life infection results in augmented airway responses in adult mice.", Infect Immun, pp. IAI0054821, 2021 Nov 15.
PMID: 34780280
Boese, C. J., A. Amoiroglou, and G. C. Rogers, "Centrosome duplication", Encyclopedia of Biological Chemistry, 3rd, vol. 5, 2021.
Hartiala, J. A., Y. Han, Q. Jia, J. R. Hilser, P. Huang, J. Gukasyan, W. S. Schwartzman, Z. Cai, S. Biswas, D-A. Trégouët, et al., "Genome-wide analysis identifies novel susceptibility loci for myocardial infarction.", Eur Heart J, vol. 42, issue 9, pp. 919-933, 2021 Mar 01.
PMCID: PMC7936531 PMID: 33532862
Rivas, C. M., M. C. Yee, K. J. Addison, M. Lovett, K. Pal, J. G. Ledford, G. Dussor, T. J. Price, J. Vagner, K. A. DeFea, et al., "Novel proteinase-activated receptor-2 (PAR2) antagonist C391 inhibits Alternaria-induced human airway epithelial signaling in vitro and asthma indicators in acute exposure murine models.", Br J Pharmacol, 2021 Nov 28.
PMID: 34841515
Colpan, M., J. Iwanski, and C. C. Gregorio, "CAP2 is a regulator of actin pointed end dynamics and myofibrillogenesis in cardiac muscle.", Commun Biol, vol. 4, issue 1, pp. 365, 2021 Mar 19.
PMCID: PMC7979805 PMID: 33742108
Örd, T., K. Õunap, L. Stolze, R. Aherrahrou, V. Nurminen, I. Selvarajan, A. Toropainen, T. Lönnberg, E. Aavik, S. Ylä-Herttuala, et al., "Single-Cell Epigenomics and Functional Fine-Mapping of Atherosclerosis GWAS Loci.", Circ Res, 2021 May 24.
PMID: 34024118
Dy, A. Blythe C., P. R. Langlais, N. K. Barker, K. J. Addison, S. Tanyaratsrisakul, S. Boitano, S. A. Christenson, M. Kraft, D. Meyers, E. R. Bleecker, et al., "Myeloid-associated differentiation marker is a novel SP-A-associated transmembrane protein whose expression on airway epithelial cells correlates with asthma severity.", Sci Rep, vol. 11, issue 1, pp. 23392, 2021 Dec 03.
PMID: 34862427
Ellis, N., J. Zhu, M. K. Yagle, W-C. Yang, J. Huang, A. Kwako, M. M. Seidman, and M. J. Matunis, "RNF4 Regulates the BLM Helicase in Recovery From Replication Fork Collapse.", Front Genet, vol. 12, pp. 753535, 2021.
PMCID: PMC8633118 PMID: 34868226
Polverino, F., T. David Wu, J. Rojas-Quintero, X. Wang, J. Mayo, M. Tomchaney, J. Tram, S. Packard, D. Zhang, K. H. Cleveland, et al., "Metformin: Experimental and Clinical Evidence for a Potential Role in Emphysema Treatment.", Am J Respir Crit Care Med, 2021 May 25.
PMID: 34033525
Rico, K., S. Duan, R. L. Pandey, Y. Chen, J. T. Chakrabarti, J. Starr, Y. Zavros, T. Else, B. W. Katona, D. C. Metz, et al., "Genome analysis identifies differences in the transcriptional targets of duodenal versus pancreatic neuroendocrine tumours.", BMJ Open Gastroenterol, vol. 8, issue 1, 2021 Nov.
PMCID: PMC8576490 PMID: 34750164
Martinez, J. A., M. B. Skiba, H-H. Sherry Chow, W. M. Chew, K. Saboda, P. Lance, N. A. Ellis, and E. T. Jacobs, "A Protective Role for Arachidonic Acid Metabolites against Advanced Colorectal Adenoma in a Phase III Trial of Selenium.", Nutrients, vol. 13, issue 11, 2021 Oct 29.
PMCID: PMC8621008 PMID: 34836131
Casillas, A. L., S. S. Chauhan, R. K. Toth, A. G. Sainz, A. N. Clements, C. C. Jensen, P. R. Langlais, C. K. Miranti, A. E. Cress, and N. A. Warfel, "Direct phosphorylation and stabilization of HIF-1α by PIM1 kinase drives angiogenesis in solid tumors.", Oncogene, 2021 Jul 02.
PMID: 34211090
Wusterbarth, E., Y. Chen, H. Jecius, E. Krall, R. B. Runyan, R. Pandey, and V. Nfonsam, "Cartilage Oligomeric Matrix Protein, COMP may be a Better Prognostic Marker Than CEACAM5 and Correlates With Colon Cancer Molecular Subtypes, Tumor Aggressiveness and Overall Survival.", J Surg Res, vol. 270, pp. 169-177, 2021 Oct 20.
PMID: 34687957
Pandey, R., M. Zhou, Y. Chen, D. Darmoul, C. C. Kisiel, V. N. Nfonsam, and N. A. Ignatenko, "Molecular Pathways Associated with Kallikrein 6 Overexpression in Colorectal Cancer.", Genes (Basel), vol. 12, issue 5, 2021 05 16.
PMCID: PMC8157155 PMID: 34065672
Batai, K., M. J. Trejo, Y. Chen, L. N. Kohler, P. Lance, N. A. Ellis, M. C. Cornelis, H-H. Sherry Chow, C-H. Hsu, and E. T. Jacobs, "Genome-Wide Association Study of Response to Selenium Supplementation and Circulating Selenium Concentrations in Adults of European Descent.", J Nutr, vol. 151, issue 2, pp. 293-302, 2021 02 01.
PMCID: PMC7849979 PMID: 33382417
Cheng, J. N., J. B. Frye, S. A. Whitman, A. G. Kunihiro, R. Pandey, and J. L. Funk, "A Role for TGFβ Signaling in Preclinical Osteolytic Estrogen Receptor-Positive Breast Cancer Bone Metastases Progression.", Int J Mol Sci, vol. 22, issue 9, 2021 Apr 24.
PMCID: PMC8123146 PMID: 33923316